{
  "_id": "6a129975acfb0bcc41d0daab",
  "Package": "BioCircos",
  "Title": "Interactive Circular Visualization of Genomic Data using\n'htmlwidgets' and 'BioCircos.js'",
  "Version": "0.3.4",
  "Authors@R": "c(person(\"Loan\", \"Vulliard\", email = \"lvulliard@cemm.at\", role = c(\"trl\", \"cre\")),\nperson(\"Xiaowei\", \"Chen\", email = \"chenxiaowei@moon.ibp.ac.cn\", role = c(\"aut\")),\nperson(\"Ya\", \"Cui\", email = \"cui_ya@163.com\", role = c(\"aut\")))",
  "Description": "Implement in 'R' interactive Circos-like visualizations of\ngenomic data, to map information such as genetic variants,\ngenomic fusions and aberrations to a circular genome, as\nproposed by the 'JavaScript' library 'BioCircos.js', based on\nthe 'JQuery' and 'D3' technologies. The output is by default\ndisplayed in stand-alone HTML documents or in the 'RStudio'\nviewer pane. Moreover it can be integrated in 'R Markdown'\ndocuments and 'Shiny' applications.",
  "License": "GPL-2 | file LICENSE",
  "Encoding": "UTF-8",
  "URL": "https://github.com/lvulliard/BioCircos.R",
  "RoxygenNote": "6.1.1",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "cmake make libuv1-dev",
  "Repository": "https://lvulliard.r-universe.dev",
  "Date/Publication": "2019-05-03 13:41:24 UTC",
  "RemoteUrl": "https://github.com/lvulliard/biocircos.r",
  "RemoteRef": "HEAD",
  "RemoteSha": "99db76448f1f62da1115fa973962939d3039b4dc",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-24 06:21:23 UTC",
    "User": "root"
  },
  "Author": "Loan Vulliard [trl, cre],\nXiaowei Chen [aut],\nYa Cui [aut]",
  "Maintainer": "Loan Vulliard <lvulliard@cemm.at>",
  "MD5sum": "08a40086239b92ba963174a4df8a40aa",
  "_user": "lvulliard",
  "_type": "src",
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  "_published": "2026-05-24T06:23:49.009Z",
  "_distro": "noble",
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  "_commit": {
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    "author": "Loan Vulliard <lvulliard@cemm.oeaw.ac.at>",
    "committer": "Loan Vulliard <lvulliard@cemm.oeaw.ac.at>",
    "message": "Add export section to the vignette\n",
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  "_maintainer": {
    "name": "Loan Vulliard",
    "email": "lvulliard@cemm.at"
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  "_dependencies": [
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    },
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    },
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      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "lvulliard",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_topics": [
    "biocircos",
    "bioinformatics",
    "circos",
    "circos-graphs",
    "htmlwidgets",
    "shiny"
  ],
  "_stars": 38,
  "_contributors": [
    {
      "user": "koalive",
      "count": 65,
      "uuid": 6972580
    }
  ],
  "_userbio": {
    "uuid": 9748099,
    "type": "organization",
    "name": "lvulliard"
  },
  "_downloads": {
    "count": 301,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/BioCircos"
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  "_mentions": 9,
  "_devurl": "https://github.com/lvulliard/biocircos.r",
  "_searchresults": 70,
  "_rbuild": "4.6.0",
  "_assets": [
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    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/lvulliard/biocircos.r",
  "_realowner": "lvulliard",
  "_cranurl": true,
  "_releases": [
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      "version": "0.2.2",
      "date": "2017-12-21"
    },
    {
      "version": "0.3.3",
      "date": "2018-02-15"
    },
    {
      "version": "0.3.4",
      "date": "2019-03-19"
    }
  ],
  "_exports": [
    "BioCircos",
    "BioCircosArcTrack",
    "BioCircosBackgroundTrack",
    "BioCircosBarTrack",
    "BioCircosCNVTrack",
    "BioCircosHeatmapTrack",
    "BioCircosLineTrack",
    "BioCircosLinkTrack",
    "BioCircosOutput",
    "BioCircosSNPTrack",
    "BioCircosTextTrack",
    "BioCircosTracklist",
    "renderBioCircos"
  ],
  "_help": [
    {
      "page": "BioCircos",
      "title": "BioCircos",
      "topics": [
        "BioCircos"
      ]
    },
    {
      "page": "BioCircos-shiny",
      "title": "Shiny bindings for BioCircos",
      "topics": [
        "BioCircos-shiny",
        "BioCircosOutput",
        "renderBioCircos"
      ]
    },
    {
      "page": "BioCircosArcTrack",
      "title": "Create a track with arcs to be added to a BioCircos tracklist",
      "topics": [
        "BioCircosArcTrack"
      ]
    },
    {
      "page": "BioCircosBackgroundTrack",
      "title": "Create a background track to be added to a BioCircos tracklist",
      "topics": [
        "BioCircosBackgroundTrack"
      ]
    },
    {
      "page": "BioCircosLinkTrack",
      "title": "Create an inner track with links to be added to a BioCircos tracklist",
      "topics": [
        "BioCircosLinkTrack"
      ]
    },
    {
      "page": "BioCircosSNPTrack",
      "title": "Create a track with SNPs to be added to a BioCircos tracklist",
      "topics": [
        "BioCircosSNPTrack"
      ]
    },
    {
      "page": "BioCircosTextTrack",
      "title": "Create a Text track to be added to a BioCircos tracklist",
      "topics": [
        "BioCircosTextTrack"
      ]
    },
    {
      "page": "BioCircosTracklist",
      "title": "Create a list of BioCircos tracks",
      "topics": [
        "+.BioCircosTracklist",
        "-.BioCircosTracklist",
        "BioCircosTracklist"
      ]
    }
  ],
  "_readme": "https://github.com/lvulliard/biocircos.r/raw/HEAD/README.md",
  "_rundeps": [
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    "bslib",
    "cachem",
    "cli",
    "digest",
    "evaluate",
    "fastmap",
    "fontawesome",
    "fs",
    "highr",
    "htmltools",
    "htmlwidgets",
    "jquerylib",
    "jsonlite",
    "knitr",
    "lifecycle",
    "memoise",
    "mime",
    "plyr",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "rmarkdown",
    "sass",
    "tinytex",
    "xfun",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "BioCircos.Rmd",
      "filename": "BioCircos.html",
      "title": "BioCircos: Generating circular multi-track plots",
      "author": "Loan Vulliard",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Motivation",
        "Installation",
        "From CRAN",
        "From Github",
        "Generating Circos-like visualizations",
        "Principle",
        "Genome configuration",
        "Tracklists",
        "Text track",
        "Background track",
        "SNP track",
        "Arc track",
        "Link track",
        "Bar tracks",
        "CNV tracks",
        "Heatmap tracks",
        "Line tracks",
        "Removing track",
        "Multi-track example",
        "Saving plot as a standalone document",
        "Contact",
        "Credits",
        "Session info"
      ],
      "created": "2017-12-18 15:51:21",
      "modified": "2019-05-03 13:41:24",
      "commits": 17
    }
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  "_nocasepkg": "biocircos",
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